C57BL/6JCya-Ddx6em1flox/Cya
Common Name:
Ddx6-flox
Product ID:
S-CKO-02024
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
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Basic Information
Strain Name
Ddx6-flox
Strain ID
CKOCMP-13209-Ddx6-B6J-VA
Gene Name
Product ID
S-CKO-02024
Gene Alias
1110001P04Rik; C430015D01Rik; E230023J21Rik; HLR2; mRCK/P54; p54; rck
Background
C57BL/6JCya
NCBI ID
Modification
Conditional knockout
Chromosome
9
Phenotype
Document
Application
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Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Ddx6em1flox/Cya mice (Catalog S-CKO-02024) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000170489
NCBI RefSeq
NM_001110826
Target Region
Exon 3~4
Size of Effective Region
~2.1 kb
Detailed Document
Overview of Gene Research
Ddx6, also known as Rck/p54, is a member of the DEAD-box family of helicases highly conserved from unicellular eukaryotes to vertebrates. It is an essential component of cytoplasmic RNA-processing bodies (P-bodies) and plays a crucial role in multiple post-transcriptional processes such as mRNA storage, translational repression, and decay [3]. It is also involved in pathways like miRNA-mediated gene silencing, alternative translation initiation, and RNA editing [3,7]. In addition, Ddx6 has been implicated in the regulation of cell fate transitions, stress granule and P-body assembly, and immune-related regulatory networks, making it a key player in maintaining cellular homeostasis [1,2,4]. Genetic models, especially knockout (KO) and conditional knockout (CKO) mouse models, are valuable tools for studying its functions.
Suppression of Ddx6 in human and mouse primed embryonic stem cells endows them with a differentiation-resistant, “hyper-pluripotent” state and enables easy reprogramming to a naive state [1]. In adult progenitors, Ddx6 controls the balance between self-renewal and differentiation in a context-dependent manner [1]. Ddx6-silencing in non-immune cells suppresses the NF-κB pathway and inhibits activation of the IL-6 amplifier, while its overexpression enhances NF-κB promoter activity, suggesting its involvement in the pathogenesis of inflammatory diseases [5]. In pancreatic cancer, compared with adjacent tissues, Ddx6 expression is abnormally increased in human pancreatic cancer tissues, and overexpression promotes cancer cell proliferation and tumor formation, while knockdown has the opposite effects [6].
In conclusion, Ddx6 is a multifunctional regulator in post-transcriptional gene expression. Studies using KO/CKO mouse models have revealed its significance in cell fate determination, stress response, and the pathogenesis of inflammatory and cancerous diseases. Understanding Ddx6's functions provides insights into biological processes and may offer potential therapeutic targets for related diseases.
References:
1. Di Stefano, Bruno, Luo, En-Ching, Haggerty, Chuck, Yeo, Gene W, Hochedlinger, Konrad. 2019. The RNA Helicase DDX6 Controls Cellular Plasticity by Modulating P-Body Homeostasis. In Cell stem cell, 25, 622-638.e13. doi:10.1016/j.stem.2019.08.018. https://pubmed.ncbi.nlm.nih.gov/31588046/
2. Ripin, Nina, Macedo de Vasconcelos, Luisa, Ugay, Daniella A, Parker, Roy. 2024. DDX6 modulates P-body and stress granule assembly, composition, and docking. In The Journal of cell biology, 223, . doi:10.1083/jcb.202306022. https://pubmed.ncbi.nlm.nih.gov/38536035/
3. Ostareck, Dirk H, Naarmann-de Vries, Isabel S, Ostareck-Lederer, Antje. 2014. DDX6 and its orthologs as modulators of cellular and viral RNA expression. In Wiley interdisciplinary reviews. RNA, 5, 659-78. doi:10.1002/wrna.1237. https://pubmed.ncbi.nlm.nih.gov/24788243/
4. Wiley, Mandi M, Khatri, Bhuwan, Joachims, Michelle L, Nordmark, Gunnel, Lessard, Christopher J. 2023. Variants in the DDX6-CXCR5 autoimmune disease risk locus influence the regulatory network in immune cells and salivary gland. In bioRxiv : the preprint server for biology, , . doi:10.1101/2023.10.05.561076. https://pubmed.ncbi.nlm.nih.gov/39071447/
5. Naito, Seiichiro, Tanaka, Hiroki, Jiang, Jing-Jing, Hashimoto, Shigeru, Murakami, Masaaki. 2024. DDX6 is involved in the pathogenesis of inflammatory diseases via NF-κB activation. In Biochemical and biophysical research communications, 703, 149666. doi:10.1016/j.bbrc.2024.149666. https://pubmed.ncbi.nlm.nih.gov/38377944/
6. Deng, Xin, Liu, Zhen, Wang, Baosheng, Ma, Jia, Meng, Xiangpeng. . The DDX6/KIFC1 signaling axis, as regulated by YY1, contributes to the malignant behavior of pancreatic cancer. In FASEB journal : official publication of the Federation of American Societies for Experimental Biology, 38, e23581. doi:10.1096/fj.202400166R. https://pubmed.ncbi.nlm.nih.gov/38551642/
7. Shih, Chia-Yu, Chen, Yun-Chi, Lin, Heng-Yi, Chu, Chia-Ying. 2023. RNA Helicase DDX6 Regulates A-to-I Editing and Neuronal Differentiation in Human Cells. In International journal of molecular sciences, 24, . doi:10.3390/ijms24043197. https://pubmed.ncbi.nlm.nih.gov/36834609/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen