C57BL/6JCya-Cyb5r4em1flox/Cya
Common Name:
Cyb5r4-flox
Product ID:
S-CKO-09637
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
Quantity
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Basic Information
Strain Name
Cyb5r4-flox
Strain ID
CKOCMP-266690-Cyb5r4-B6J-VA
Gene Name
Product ID
S-CKO-09637
Gene Alias
2810034J18Rik; B5+B5R; Cb5cb5r; Ncb5or; b5/b5r; b5b5r
Background
C57BL/6JCya
NCBI ID
Modification
Conditional knockout
Chromosome
9
Phenotype
Document
Application
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Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Cyb5r4em1flox/Cya mice (Catalog S-CKO-09637) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000168529
NCBI RefSeq
NM_024195
Target Region
Exon 2
Size of Effective Region
~0.7 kb
Detailed Document
Overview of Gene Research
CYB5R4, also known as cytochrome b5 reductase 4, is an orphan reductase that serves as an evolutionarily conserved activator of PP4 and PP6 among serine/threonine phosphoprotein phosphatases (PPPs), crucial for intracellular signaling in eukaryotes. Heme binding by CYB5R4 is essential for its function, which mechanistically involves the reduction of metal ions in the active site of PP4 and PP6 [6].
In podocytes, siRNA silencing of CYB5R4 led to significant downregulation of CD2AP and synaptopodin, expanding the list of genes essential for podocyte cytoskeletons [1]. In infertile men, CYB5R4 was among the genes remarkably under-expressed, suggesting its potential role in processes related to gametogenesis, fertilization, and embryo development [2]. In Jiaxian Red cattle and Bohai Black cattle, CYB5R4 was identified in genomic regions associated with meat quality traits and fat deposition respectively [3,4]. In Japanese Black cattle, CYB5R4 was selected as a candidate gene for a QTL related to oleic acid percentage [5]. In a chicken F2 crossbred population, CYB5R4 was associated with fatty acid composition in breast meat [7].
In conclusion, CYB5R4 plays essential roles in multiple biological processes, from cell-specific functions in podocytes to being associated with traits in various livestock species related to reproduction and meat quality. Functional studies, such as those using siRNA silencing in podocytes, have revealed its significance in maintaining cellular structures and functions, which could potentially have implications for understanding related diseases and improving livestock breeding.
References:
1. Lu, Yuqiu, Ye, Yuting, Bao, Wenduona, Liu, Zhihong, Shi, Shaolin. 2017. Genome-wide identification of genes essential for podocyte cytoskeletons based on single-cell RNA sequencing. In Kidney international, 92, 1119-1129. doi:10.1016/j.kint.2017.04.022. https://pubmed.ncbi.nlm.nih.gov/28709640/
2. Cheung, Stephanie, Parrella, Alessandra, Rosenwaks, Zev, Palermo, Gianpiero D. 2019. Genetic and epigenetic profiling of the infertile male. In PloS one, 14, e0214275. doi:10.1371/journal.pone.0214275. https://pubmed.ncbi.nlm.nih.gov/30897172/
3. Xia, Xiaoting, Zhang, Shunjin, Zhang, Huaju, Chen, Hong, Huang, Yongzhen. 2021. Assessing genomic diversity and signatures of selection in Jiaxian Red cattle using whole-genome sequencing data. In BMC genomics, 22, 43. doi:10.1186/s12864-020-07340-0. https://pubmed.ncbi.nlm.nih.gov/33421990/
4. Ma, Xiaohui, Cheng, Haijian, Liu, Yangkai, Song, Enliang, Lei, Chuzhao. 2022. Assessing Genomic Diversity and Selective Pressures in Bohai Black Cattle Using Whole-Genome Sequencing Data. In Animals : an open access journal from MDPI, 12, . doi:10.3390/ani12050665. https://pubmed.ncbi.nlm.nih.gov/35268233/
5. Kawaguchi, Fuki, Kigoshi, Hiroto, Fukushima, Moriyuki, Mannen, Hideyuki, Sasazaki, Shinji. 2019. Whole-genome resequencing to identify candidate genes for the QTL for oleic acid percentage in Japanese Black cattle. In Animal science journal = Nihon chikusan Gakkaiho, 90, 467-472. doi:10.1111/asj.13179. https://pubmed.ncbi.nlm.nih.gov/30780197/
6. Meeusen, Bob, Ambjørn, Sara M, Veis, Jiri, Ogris, Egon, Nilsson, Jakob. 2025. A functional map of phosphoprotein phosphatase regulation identifies an evolutionary conserved reductase for the catalytic metal ions. In bioRxiv : the preprint server for biology, , . doi:10.1101/2025.02.12.637884. https://pubmed.ncbi.nlm.nih.gov/39990307/
7. Cho, Eunjin, Kim, Minjun, Cho, Sunghyun, Jin, Daehyeok, Lee, Jun Heon. 2023. A genome-wide association study for the fatty acid composition of breast meat in an F2 crossbred chicken population. In Journal of animal science and technology, 65, 735-747. doi:10.5187/jast.2023.e1. https://pubmed.ncbi.nlm.nih.gov/37970507/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen