C57BL/6JCya-Ifih1em1flox/Cya
Common Name:
Ifih1-flox
Product ID:
S-CKO-15102
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
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Basic Information
Strain Name
Ifih1-flox
Strain ID
CKOCMP-71586-Ifih1-B6J-VA
Gene Name
Product ID
S-CKO-15102
Gene Alias
9130009C22Rik; Helicard; Hlcd; MDA5; RLR-2
Background
C57BL/6JCya
NCBI ID
Modification
Conditional knockout
Chromosome
2
Phenotype
Document
Application
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Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Ifih1em1flox/Cya mice (Catalog S-CKO-15102) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000028259
NCBI RefSeq
NM_027835
Target Region
Exon 2
Size of Effective Region
~1.1 kb
Detailed Document
Overview of Gene Research
Ifih1, also known as the gene encoding melanoma differentiation-associated protein 5 (MDA5), is an essential innate immune regulator. It plays a crucial role in the early detection of viral infections, mediating the innate immune system's interferon response to double-stranded RNA (dsRNA) formed by certain viruses during their life cycle [3,4]. It is also involved in pathways related to inflammation and macrophage polarization.
In acute respiratory distress syndrome (ARDS), IFIH1 contributes to M1 macrophage polarization. Knockdown of IFIH1 in RAW264.7 cell line and BMDMs using shIFIH1 lentivirus confirmed that IFIH1 is a novel regulator for promoting M1 macrophage polarization, and it regulates M1 polarization by activating IRF3 [1]. In addition, in the context of HIV-1, loss-of-function screen in human monocyte-derived dendritic cells with short hairpin RNA-expressing lentivectors targeting IFIH1 prevented activation of the interferon-stimulated gene ISG15, demonstrating that IFIH1 is the innate immune receptor for intron-containing RNA from the HIV-1 provirus [2]. Loss-of-function variants of IFIH1 identified in nine patients through whole-exome sequencing were associated with recurrent infections, inflammatory diseases, severe COVID-19 or multisystem inflammatory syndrome in children (MIS-C), and expression analysis in PBMCs of one patient with a specific variant showed disrupted immune response upon stimulation with Poly(I:C) [4].
In conclusion, Ifih1 is a key gene in the innate immune response, playing important roles in detecting viral infections and regulating macrophage polarization. Studies using gene-knockdown models in cell lines and identification of loss-of-function variants in patients have revealed its significance in diseases such as ARDS, HIV-1 infection-related inflammation, and SARS-CoV-2-related infectious diseases.
References:
1. Zhang, Shi, Chu, Cuilin, Wu, Zongsheng, Yang, Yi, Qiu, Haibo. 2021. IFIH1 Contributes to M1 Macrophage Polarization in ARDS. In Frontiers in immunology, 11, 580838. doi:10.3389/fimmu.2020.580838. https://pubmed.ncbi.nlm.nih.gov/33519803/
2. Guney, Mehmet Hakan, Nagalekshmi, Karthika, McCauley, Sean Matthew, Aydemir, Ozkan, Luban, Jeremy. 2024. IFIH1 (MDA5) is required for innate immune detection of intron-containing RNA expressed from the HIV-1 provirus. In Proceedings of the National Academy of Sciences of the United States of America, 121, e2404349121. doi:10.1073/pnas.2404349121. https://pubmed.ncbi.nlm.nih.gov/38985764/
3. Looney, Benjamin M, Xia, Chang-Qing, Concannon, Patrick, Ostrov, David A, Clare-Salzler, Michael J. . Effects of type 1 diabetes-associated IFIH1 polymorphisms on MDA5 function and expression. In Current diabetes reports, 15, 96. doi:10.1007/s11892-015-0656-8. https://pubmed.ncbi.nlm.nih.gov/26385483/
4. Najm, Rania, Yavuz, Lemis, Jain, Ruchi, Abou Tayoun, Ahmad, Kandasamy, Richard K. 2024. IFIH1 loss of function predisposes to inflammatory and SARS-CoV-2-related infectious diseases. In Scandinavian journal of immunology, 100, e13373. doi:10.1111/sji.13373. https://pubmed.ncbi.nlm.nih.gov/38757311/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen