C57BL/6JCya-Rpusd4em1flox/Cya
Common Name:
Rpusd4-flox
Product ID:
S-CKO-15300
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
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Basic Information
Strain Name
Rpusd4-flox
Strain ID
CKOCMP-71989-Rpusd4-B6J-VA
Gene Name
Product ID
S-CKO-15300
Gene Alias
2410001E19Rik
Background
C57BL/6JCya
NCBI ID
Modification
Conditional knockout
Chromosome
9
Phenotype
Document
Application
--
Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Rpusd4em1flox/Cya mice (Catalog S-CKO-15300) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000034543
NCBI RefSeq
NM_028040
Target Region
Exon 3
Size of Effective Region
~2.0 kb
Detailed Document
Overview of Gene Research
RPUSD4, an uncharacterized mitochondrial putative pseudouridine synthase, is essential for mitochondrial function. It is involved in pathways such as oxidative phosphorylation and mitochondrial gene expression, playing a crucial role in maintaining normal cellular energy metabolism and mitochondrial translation [1,2,3]. Genetic models, especially gene knockout models, are valuable for further exploring its functions.
Depletion of RPUSD4 leads to a severe reduction of the steady-state level of the 16S mitochondrial (mt) rRNA, defects in the biogenesis of the mitoribosome large subunit, and consequently in mitochondrial translation. RPUSD4 binds 16S mt-rRNA, mt-tRNAMet, and mt-tRNAPhe, and is responsible for pseudouridylation of the latter. Also, it is part of a protein module in mitochondrial RNA granules essential for mitochondrial protein synthesis and cell viability, and its depletion causes specific mitochondrial protein synthesis and oxidative phosphorylation assembly defects without affecting mitochondrial mRNA levels [2,3].
In conclusion, RPUSD4 is essential for mitochondrial gene expression, specifically in the processes of rRNA stability, mitoribosome assembly, and mitochondrial translation. Through studies using gene-knockout models, its role in maintaining normal mitochondrial function and thus in processes like oxidative phosphorylation has been revealed. Understanding RPUSD4 can provide insights into mitochondrial-related diseases and cellular energy metabolism disorders.
References:
1. Arroyo, Jason D, Jourdain, Alexis A, Calvo, Sarah E, Root, David E, Mootha, Vamsi K. 2016. A Genome-wide CRISPR Death Screen Identifies Genes Essential for Oxidative Phosphorylation. In Cell metabolism, 24, 875-885. doi:10.1016/j.cmet.2016.08.017. https://pubmed.ncbi.nlm.nih.gov/27667664/
2. Zaganelli, Sofia, Rebelo-Guiomar, Pedro, Maundrell, Kinsey, Minczuk, Michal, Martinou, Jean-Claude. 2017. The Pseudouridine Synthase RPUSD4 Is an Essential Component of Mitochondrial RNA Granules. In The Journal of biological chemistry, 292, 4519-4532. doi:10.1074/jbc.M116.771105. https://pubmed.ncbi.nlm.nih.gov/28082677/
3. Antonicka, Hana, Choquet, Karine, Lin, Zhen-Yuan, Kleinman, Claudia L, Shoubridge, Eric A. 2016. A pseudouridine synthase module is essential for mitochondrial protein synthesis and cell viability. In EMBO reports, 18, 28-38. doi:10.15252/embr.201643391. https://pubmed.ncbi.nlm.nih.gov/27974379/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen