C57BL/6JCya-Atp6v1dem1flox/Cya
Common Name:
Atp6v1d-flox
Product ID:
S-CKO-15783
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
Quantity
Price:
Contact for Pricing
Basic Information
Strain Name
Atp6v1d-flox
Strain ID
CKOCMP-73834-Atp6v1d-B6J-VA
Gene Name
Product ID
S-CKO-15783
Gene Alias
1110004P10Rik; Atp6m; VATD; Vma8
Background
C57BL/6JCya
NCBI ID
Modification
Conditional knockout
Chromosome
12
Phenotype
Document
Application
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Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Atp6v1dem1flox/Cya mice (Catalog S-CKO-15783) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000021536
NCBI RefSeq
NM_023721
Target Region
Exon 2
Size of Effective Region
~1.1 kb
Detailed Document
Overview of Gene Research
Atp6v1d, also known as ATPase H+ transporting V1 subunit D, is a subunit of the vacuolar-type H+-translocating ATPase (V-ATPase). V-ATPase is involved in processes such as lysosomal acidification and autophagy-lysosomal pathway, which are crucial for maintaining cellular homeostasis and normal biological functions [1,2,3,6].
In hepatocellular carcinoma (HCC), ATP6V1D knockdown inhibits HCC stemness and malignant progression both in vitro and in vivo. Mechanistically, it enhances HCC stemness and progression by maintaining autophagic flux, through promoting lysosomal acidification and enhancing the interaction between CHMP4B and IST1 to foster ESCRT-III complex assembly, thus facilitating autophagosome-lysosome fusion [1].
In Alzheimer's disease, ATP6V1D has been identified as a biomarker, and its down-regulated expression is considered a protective factor. It is potentially involved in pathways related to "interferon gamma response", "inflammatory response", and "TNFα signaling via NFκB" [4].
In depression, SNPs (rs3759755 and rs10144417) in the promoter region of the ATP6V1D are associated with susceptibility to depression [5].
In conclusion, Atp6v1d plays a significant role in multiple biological processes mainly through its involvement in the autophagy-lysosomal pathway. Its functions are closely related to diseases like HCC, Alzheimer's disease, and depression. Studies on Atp6v1d knockout or knockdown models have provided valuable insights into the underlying mechanisms of these diseases, helping to understand the biological functions of Atp6v1d and offering potential therapeutic targets for related diseases [1,4,5].
References:
1. Xu, Zhijie, Liu, Ruiyang, Ke, Haoying, Zhao, Zhiju, Xiao, Fei. 2024. ATP6V1D drives hepatocellular carcinoma stemness and progression via both lysosome acidification-dependent and -independent mechanisms. In Autophagy, 21, 513-529. doi:10.1080/15548627.2024.2406186. https://pubmed.ncbi.nlm.nih.gov/39316516/
2. Wang, Shaogui, Ni, Hong-Min, Chao, Xiaojuan, Pacher, Pal, Ding, Wen-Xing. 2019. Impaired TFEB-mediated lysosomal biogenesis promotes the development of pancreatitis in mice and is associated with human pancreatitis. In Autophagy, 15, 1954-1969. doi:10.1080/15548627.2019.1596486. https://pubmed.ncbi.nlm.nih.gov/30894069/
3. Zhu, Meirong, Jin, Tongyu, Wu, Ding, Zhang, Shanchao, Wang, Aihua. 2023. Transcriptomics Analysis Revealed Key Genes Associated with Macrophage Autophagolysosome in Male ApoE-/- Mice Aortic Atherosclerosis. In Journal of inflammation research, 16, 5125-5144. doi:10.2147/JIR.S426155. https://pubmed.ncbi.nlm.nih.gov/37965353/
4. Zeng, Junfeng, Zhang, Ruihua, Xu, Huihua, Zhang, Chengwu, Lu, Li. 2025. Integrative single-cell RNA sequencing and mendelian randomization analysis reveal the potential role of synaptic vesicle cycling-related genes in Alzheimer's disease. In The journal of prevention of Alzheimer's disease, 12, 100097. doi:10.1016/j.tjpad.2025.100097. https://pubmed.ncbi.nlm.nih.gov/40021385/
5. Liang, Peng, Chen, Jing-Jie, Yang, Xue, Yang, Ping-Liang, Liang, Yun-Dan. 2025. Association and functional study of ATP6V1D and GPHN gene polymorphisms with depression in Chinese population. In World journal of psychiatry, 15, 102182. doi:10.5498/wjp.v15.i4.102182. https://pubmed.ncbi.nlm.nih.gov/40309610/
6. Nakadera, Eisuke, Yamashina, Shunhei, Izumi, Kousuke, Ueno, Takashi, Watanabe, Sumio. 2015. Inhibition of mTOR improves the impairment of acidification in autophagic vesicles caused by hepatic steatosis. In Biochemical and biophysical research communications, 469, 1104-10. doi:10.1016/j.bbrc.2015.12.010. https://pubmed.ncbi.nlm.nih.gov/26687947/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen