C57BL/6JCya-Sox2otem1flox/Cya
Common Name:
Sox2ot-flox
Product ID:
S-CKO-17447
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
Quantity
Price:
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Basic Information
Strain Name
Sox2ot-flox
Strain ID
CKOCMP-320478-Sox2ot-B6J-VA
Gene Name
Product ID
S-CKO-17447
Gene Alias
B230215L15Rik
Background
C57BL/6JCya
NCBI ID
Modification
Conditional knockout
Chromosome
3
Phenotype
Document
Application
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Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Sox2otem1flox/Cya mice (Catalog S-CKO-17447) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000197977
NCBI RefSeq
NR_015580
Target Region
Exon 5
Size of Effective Region
~3.7 kb
Detailed Document
Overview of Gene Research
SOX2OT, the SOX2 overlapping transcript, is a long non-coding RNA. It is highly expressed in embryonic stem cells and is dynamically regulated during vertebrate embryogenesis, being delimited to the brain in adult mice and humans [5]. It has been implicated in multiple biological processes and diseases. Its mechanisms involve various factors and signaling pathways, and it may have both oncogenic and tumor-suppressor roles in different contexts [1].
In septic cardiomyopathy, knockdown of SOX2OT in mice recovered reduced cardiac function and improved mitochondrial membrane potential impaired by lipopolysaccharide (LPS), indicating it contributes to mitochondrial dysfunction via inhibiting SOX2 expression [3]. In esophageal squamous cell carcinoma (ESCC) tumorspheres, RNAi-mediated knockdown of SOX2OT suppressed stemness-related gene expression, sphere formation, and docetaxel resistance [2]. In heart failure, SOX2OT knockdown reduced myocardial injury and collagen deposition in HF mice, and it was found that SOX2OT promoted myocardial fibrosis by activating the TGF-β1/Smad3 pathway and formed a positive feedback loop with Smad3 [4].
In conclusion, SOX2OT plays crucial roles in processes like maintaining stem cell-like characteristics, mitochondrial function, and myocardial fibrosis. The gene knockout and related functional studies in mouse models have provided insights into its functions in diseases such as septic cardiomyopathy, ESCC, and heart failure, suggesting it could be a potential therapeutic target in these disease areas.
References:
1. Wang, Ying, Wu, Nayiyuan, Luo, Xia, Liao, Qianjin, Wang, Jing. 2019. SOX2OT, a novel tumor-related long non-coding RNA. In Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie, 123, 109725. doi:10.1016/j.biopha.2019.109725. https://pubmed.ncbi.nlm.nih.gov/31865145/
2. Haghi, Boshra, Saghaeian Jazi, Marie, Khosravi, Ayyoob, Jafari, Seyyed Mehdi, Asadi, Jahanbakhsh. 2022. SOX2OT lncRNA Inhibition Suppresses the Stemness Characteristics of Esophageal Tumorspheres. In Non-coding RNA, 8, . doi:10.3390/ncrna8060080. https://pubmed.ncbi.nlm.nih.gov/36548179/
3. Chen, Mengfei, Guan, Yan, Li, Ao, Zhang, Liang, Gong, Yanxuan. 2019. LncRNA SOX2OT Mediates Mitochondrial Dysfunction in Septic Cardiomyopathy. In DNA and cell biology, 38, 1197-1206. doi:10.1089/dna.2019.4839. https://pubmed.ncbi.nlm.nih.gov/31618067/
4. Ou, Yali, Liao, Chunfeng, Li, He, Yu, Guolong. 2020. LncRNA SOX2OT/Smad3 feedback loop promotes myocardial fibrosis in heart failure. In IUBMB life, 72, 2469-2480. doi:10.1002/iub.2375. https://pubmed.ncbi.nlm.nih.gov/32959533/
5. Shahryari, Alireza, Jazi, Marie Saghaeian, Samaei, Nader M, Mowla, Seyed J. 2015. Long non-coding RNA SOX2OT: expression signature, splicing patterns, and emerging roles in pluripotency and tumorigenesis. In Frontiers in genetics, 6, 196. doi:10.3389/fgene.2015.00196. https://pubmed.ncbi.nlm.nih.gov/26136768/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen