Logo
Homepage
Explore Our Models
My Cart
Contact
Subscribe
Models
Genetically Engineered Animals
Knockout Mice
Knockout Rats
Knockin Mice
Knockin Rats
Transgenic Mice
Transgenic Rats
Model Generation Techniques
Turboknockout<sup>®</sup> Gene Targeting
ES Cell Gene Targeting
Targeted Gene Editing
Regular Transgenic
PiggyBac Transgenesis
BAC Transgenic
Research Models
HUGO-GT™ Humanized Mice
Cre Mouse Lines
Humanized Target Gene Models
Metabolic Disease Models
Ophthalmic Disease Models
Neurological Disease Models
Autoimmune Disease Models
Immunodeficient Mouse Models
Humanized Immune System Mouse Models
Oncology & Immuno-oncology Models
Covid-19 Mouse Models
MouseAtlas Model Library
Knockout Cell Line Product Catalog
Tumor Cell Line Product Catalog
AAV Standard Product Catalog
Animal Supporting Services
Breeding Services
Cryopreservation & Recovery
Phenotyping Services
BAC Modification
Custom Cell Line Models
Induced Pluripotent Stem Cells (iPSCs)
Knockout Cell Lines
Knockin Cell Lines
Point Mutation Cell Lines
Overexpression Cell Lines
Virus Packaging
Adeno-associated Virus (AAV) Packaging
Lentivirus Packaging
Adenovirus Packaging
CRO Services
By Therapeutic Area
Oncology
Ophthalmology
Neuroscience
Metabolic & Cardiovascular Diseases
Autoimmune & Inflammatory
By Drug Type
AI-Powered AAV Discovery
Gene Therapy
Oligonucleotide Therapy
Antibody Therapy
Cell Immunotherapy
Resources
Promotion
Events & Webinars
Newsroom
Blogs & Insights
Resource Vault
Reference Databases
Peer-Reviewed Citations
Rare Disease Data Center
AbSeek
Cell iGeneEditor™ System
OriCell
Quality
Facility Overview
Animal Health & Welfare
Health Reports
About Us
Corporate Overview
Our Partners
Careers
Contact Us
Login
Request a Product Quote
Select products from our catalogs and submit your request. Our team will get back to you with detailed information.
Full Name
Email
Phone Number
Organization
Job Role
Country
Catalog Type
Product Name
Additional Comments
Cyagen values your privacy. We’d like to keep you informed about our latest offerings and insights. Your preferences:
You may unsubscribe from these communications at any time. See our Privacy Policy for details on opting out and data protection.
By clicking the button below, you consent to allow Cyagen to store and process the personal information submitted in this form to provide you the content requested.
C57BL/6JCya-Ddx21em1flox/Cya
Common Name:
Ddx21-flox
Product ID:
S-CKO-17839
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
Quantity
Price:
Contact for Pricing
Basic Information
Strain Name
Ddx21-flox
Strain ID
CKOCMP-56200-Ddx21-B6J-VB
Gene Name
Ddx21
Product ID
S-CKO-17839
Gene Alias
D10Ertd645e; D10Wsu42e
Background
C57BL/6JCya
NCBI ID
56200
Modification
Conditional knockout
Chromosome
10
Phenotype
MGI:1860494
Document
Click here to download >>
Application
--
More
Rare Disease Data Center >>
Note
Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Ddx21em1flox/Cya mice (Catalog S-CKO-17839) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000045866
NCBI RefSeq
NM_019553
Target Region
Exon 2~11
Size of Effective Region
~13.3 kb
Detailed Document
Click here to download >>
Overview of Gene Research
Ddx21, a member of the DEAD-box RNA helicase family, is pivotal in RNA metabolism, participating in ribosomal RNA (rRNA) processing, transcription, and translation. It is involved in various biological processes such as mRNA transcription, alternative splicing, and is associated with pathways related to tissue differentiation, ribosome biogenesis, and genome stability. Its functions are crucial for normal cellular activities and its dysregulation may lead to diseases like cancer [1,2,3,5,8].

Glucose binds to the ATP-binding domain of Ddx21, altering its conformation, inhibiting helicase activity, and dissociating Ddx21 dimers. This glucose-induced change promotes the splicing of pro-differentiation genes during epidermal differentiation [1]. Ddx21 interacts with METTL3 for co-recruitment to chromatin via R-loops recognition, facilitating m6A deposition on nascent RNA at transcription termination regions, thus promoting transcription termination and genome stability [2]. SLERT lncRNA interacts with Ddx21, loosening Ddx21-formed rings around Pol I complexes and relieving the suppression on pre-rRNA transcription [3]. In colorectal cancer, phase-separated Ddx21 binds to the MCM5 gene locus, activating the EMT pathway and promoting metastasis [4]. Ddx21 also coordinates multiple steps of ribosome biogenesis, promoting rRNA transcription, processing, and modification in the nucleolus, and facilitating P-TEFb release from 7SK snRNP in the nucleoplasm to promote transcription of target genes [5]. In breast cancer cells, PARP-1 activation by snoRNAs leads to DDX21 ADP-ribosylation, which is essential for its nucleolar localization and promotion of rDNA transcription [6]. In acute myeloid leukaemia, super-enhancer-driven IGF2BP2 and IGF2BP3 upregulate Ddx21 in an m6A-dependent manner, and Ddx21 promotes cell proliferation by recruiting YBX1 to trigger ULK1 expression [7].

In summary, Ddx21 is essential for RNA-related biological processes, with its function being modulated by various factors. Studies, some potentially involving gene knockout models, have revealed its significance in tissue differentiation, cancer progression, and ribosome biogenesis. Understanding Ddx21's function provides insights into disease mechanisms and may offer potential therapeutic targets for related diseases [1,2,3,4,5,6,7,8].

References:
1. Miao, Weili, Porter, Douglas F, Lopez-Pajares, Vanessa, Nolan, Garry P, Khavari, Paul A. . Glucose dissociates DDX21 dimers to regulate mRNA splicing and tissue differentiation. In Cell, 186, 80-97.e26. doi:10.1016/j.cell.2022.12.004. https://pubmed.ncbi.nlm.nih.gov/36608661/
2. Hao, Jin-Dong, Liu, Qian-Lan, Liu, Meng-Xia, Yang, Yun-Gui, Ren, Jie. 2024. DDX21 mediates co-transcriptional RNA m6A modification to promote transcription termination and genome stability. In Molecular cell, 84, 1711-1726.e11. doi:10.1016/j.molcel.2024.03.006. https://pubmed.ncbi.nlm.nih.gov/38569554/
3. Xing, Yu-Hang, Yao, Run-Wen, Zhang, Yang, Yang, Li, Chen, Ling-Ling. . SLERT Regulates DDX21 Rings Associated with Pol I Transcription. In Cell, 169, 664-678.e16. doi:10.1016/j.cell.2017.04.011. https://pubmed.ncbi.nlm.nih.gov/28475895/
4. Gao, Huabin, Wei, Huiting, Yang, Yang, Wang, Jia, Han, Anjia. 2023. Phase separation of DDX21 promotes colorectal cancer metastasis via MCM5-dependent EMT pathway. In Oncogene, 42, 1704-1715. doi:10.1038/s41388-023-02687-6. https://pubmed.ncbi.nlm.nih.gov/37029300/
5. Calo, Eliezer, Flynn, Ryan A, Martin, Lance, Chang, Howard Y, Wysocka, Joanna. 2014. RNA helicase DDX21 coordinates transcription and ribosomal RNA processing. In Nature, 518, 249-53. doi:10.1038/nature13923. https://pubmed.ncbi.nlm.nih.gov/25470060/
6. Kim, Dae-Seok, Camacho, Cristel V, Nagari, Anusha, Challa, Sridevi, Kraus, W Lee. 2019. Activation of PARP-1 by snoRNAs Controls Ribosome Biogenesis and Cell Growth via the RNA Helicase DDX21. In Molecular cell, 75, 1270-1285.e14. doi:10.1016/j.molcel.2019.06.020. https://pubmed.ncbi.nlm.nih.gov/31351877/
7. Zhao, Yanchun, Zhou, Yutong, Qian, Yu, Sun, Jie, Jin, Jie. . m6A-dependent upregulation of DDX21 by super-enhancer-driven IGF2BP2 and IGF2BP3 facilitates progression of acute myeloid leukaemia. In Clinical and translational medicine, 14, e1628. doi:10.1002/ctm2.1628. https://pubmed.ncbi.nlm.nih.gov/38572589/
8. Xiao, Yalan, Fan, Jiankun, Li, Zhigang, Hou, Yu. 2024. DDX21 at the Nexus of RNA Metabolism, Cancer Oncogenesis, and Host-Virus Crosstalk: Decoding Its Biomarker Potential and Therapeutic Implications. In International journal of molecular sciences, 25, . doi:10.3390/ijms252413581. https://pubmed.ncbi.nlm.nih.gov/39769343/
Quality Control Standard
Sperm Test

Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.

Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.

Environmental Standards:SPF
Available Region:Global
Source:Cyagen
Model Library
Model Library
Resources
Resources
Animal Quality
Animal Quality
Get Support
Get Support
Address:
2255 Martin Avenue, Suite E Santa Clara, CA 95050-2709, US
Tel:
800-921-8930 (8-6pm PST)
+1408-963-0306 (lnt’l)
Fax:
408-969-0338
Email:
animal-service@cyagen.com
service@cyagen.us
CRO Services
OncologyOphthalmologyNeuroscienceMetabolic & CardiovascularAutoimmune & InflammatoryGene TherapyAntibody Therapy
About Us
Corporate OverviewOur PartnersCareersContact Us
Social Media
Disclaimer: Pricing and availability of our products and services vary by region. Listed prices are applicable to the specific countries. Please contact us for more information.
Copyright © 2025 Cyagen. All rights reserved.
Privacy Policy
Site Map
Stay Updated with the Latest from Cyagen
Get the latest news on our research models, CRO services, scientific resources, and special offers—tailored to your research needs and delivered straight to your inbox.
Full Name
Email
Organization
Country
Areas of Interest