C57BL/6JCya-Btbd2em1flox/Cya
Common Name:
Btbd2-flox
Product ID:
S-CKO-18195
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
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Basic Information
Strain Name
Btbd2-flox
Strain ID
CKOCMP-208198-Btbd2-B6J-VB
Gene Name
Product ID
S-CKO-18195
Gene Alias
2610037C03Rik; 4930512K17Rik
Background
C57BL/6JCya
NCBI ID
Modification
Conditional knockout
Chromosome
10
Phenotype
Document
Application
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Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Btbd2em1flox/Cya mice (Catalog S-CKO-18195) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000126980
NCBI RefSeq
NM_145361
Target Region
Exon 3~4
Size of Effective Region
~2.0 kb
Detailed Document
Overview of Gene Research
Btbd2, a BTB-domain-containing Kelch-like protein, belongs to a small family of proteins specific to animals [1,7]. It has been found to interact with topoisomerase I (TOP1), which is involved in DNA replication and transcription by regulating DNA supercoiling. The interaction between Btbd2 and TOP1 might play a role in various cellular processes related to DNA metabolism [1].
Research shows that Btbd2 localizes to cytoplasmic bodies and co-localizes with TRIM5δ, a RBCC/tripartite motif protein [2]. The polymorphism of Btbd2 rs11670188 is associated with glioblastoma survival, indicating its potential role in this disease [3]. Also, the interaction between Btbd2 and TOP1 requires specific TOP1 residues, and RNAi of Btbd2 in certain cells increases permissiveness to HIV-1 infection, suggesting its involvement in HIV-1 restriction [4]. Additionally, Btbd2, along with BTBD1, forms a complex with E3-RING Cullin 3 ligase, promoting TOP1-cleavage complex ubiquitination and degradation, which is part of the adaptive response to TOP1 inhibitors [5]. It also interacts with HNF1β, enabling TOP1 activation during mitosis and playing a role in chromatin remodeling and gene re-activation after mitosis [6].
In conclusion, Btbd2 is involved in multiple biological processes such as DNA-related activities, sub-cellular localization, and disease-associated functions like glioblastoma survival and HIV-1 restriction. Its interaction with various proteins and its role in different pathways highlight its significance in cellular function and disease mechanisms.
References:
1. Xu, Lixin, Yang, Lihong, Hashimoto, Keiko, Pommier, Yves, D'Arpa, Peter. 2002. Characterization of BTBD1 and BTBD2, two similar BTB-domain-containing Kelch-like proteins that interact with Topoisomerase I. In BMC genomics, 3, 1. doi:. https://pubmed.ncbi.nlm.nih.gov/11818025/
2. Xu, Lixin, Yang, Lihong, Moitra, Prasun K, Weissman, Allan M, D'Arpa, Peter. . BTBD1 and BTBD2 colocalize to cytoplasmic bodies with the RBCC/tripartite motif protein, TRIM5delta. In Experimental cell research, 288, 84-93. doi:. https://pubmed.ncbi.nlm.nih.gov/12878161/
3. Liu, Yanhong, Shete, Sanjay, Etzel, Carol J, Melin, Beatrice S, Bondy, Melissa. 2010. Polymorphisms of LIG4, BTBD2, HMGA2, and RTEL1 genes involved in the double-strand break repair pathway predict glioblastoma survival. In Journal of clinical oncology : official journal of the American Society of Clinical Oncology, 28, 2467-74. doi:10.1200/JCO.2009.26.6213. https://pubmed.ncbi.nlm.nih.gov/20368557/
4. Khurana, Bharat, Zhuang, Lei, Moitra, Prasun K, Cutler, Mary Lou, D'Arpa, Peter. 2010. Human TOP1 residues implicated in species specificity of HIV-1 infection are required for interaction with BTBD2, and RNAi of BTBD2 in old world monkey and human cells increases permissiveness to HIV-1 infection. In Virology journal, 7, 332. doi:10.1186/1743-422X-7-332. https://pubmed.ncbi.nlm.nih.gov/21092135/
5. Meroni, Alice, Grosser, Jan, Agashe, Sumedha, Baranello, Laura, Vindigni, Alessandro. 2022. NEDDylated Cullin 3 mediates the adaptive response to topoisomerase 1 inhibitors. In Science advances, 8, eabq0648. doi:10.1126/sciadv.abq0648. https://pubmed.ncbi.nlm.nih.gov/36490343/
6. Bagattin, Alessia, Tammaccaro, Salvina Laura, Chiral, Magali, Kuperwasser, Nicolas, Pontoglio, Marco. 2024. HNF1β bookmarking involves Topoisomerase 1 activation and DNA topology relaxation in mitotic chromatin. In Cell reports, 43, 114805. doi:10.1016/j.celrep.2024.114805. https://pubmed.ncbi.nlm.nih.gov/39388351/
7. Carim-Todd, L, Sumoy, L, Andreu, N, Estivill, X, Escarceller, M. . Identification and characterization of BTBD1, a novel BTB domain containing gene on human chromosome 15q24. In Gene, 262, 275-81. doi:. https://pubmed.ncbi.nlm.nih.gov/11179693/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen