C57BL/6JCya-Dtd2em1/Cya
Common Name:
Dtd2-KO
Product ID:
S-KO-09398
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
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Basic Information
Strain Name
Dtd2-KO
Strain ID
KOCMP-328092-Dtd2-B6J-VA
Gene Name
Product ID
S-KO-09398
Gene Alias
4930578F06Rik; 6530401N04Rik; ATD; B830049N13Rik
Background
C57BL/6JCya
NCBI ID
Modification
Conventional knockout
Chromosome
12
Phenotype
Document
Application
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Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Dtd2em1/Cya mice (Catalog S-KO-09398) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000021339
NCBI RefSeq
NM_029545
Target Region
Exon 1~3
Size of Effective Region
~6.9 kb
Detailed Document
Overview of Gene Research
Dtd2, short for D-aminoacyl-tRNA deacylase 2, is an enzyme with a crucial role in translation quality control. It specifically acts on D-aminoacyl-tRNAs, removing N-ethyl adducts formed on them, which are generated as a result of anaerobic stress in plants [2]. Dtd2 is of archaeal origin and is conserved from streptophyte algae to land plants, suggesting its importance in the emergence and evolution of land plants [2]. It is also involved in safeguarding the translation machinery from the harmful effects of misaminoacylated D-aminoacyl-tRNAs [3].
In plants, Dtd2 knockout studies have shown that it is essential for protecting plants from the toxicity of aldehydes such as acetaldehyde, formaldehyde, and methylglyoxal. These aldehydes can generate adducts with aminoacyl-tRNAs, and only Dtd2 can remove the stable D-aminoacyl adducts on tRNA, rescuing plants from these system-generated aldehydes. Loss of the Dtd2 gene renders plants susceptible to these toxic aldehydes [4]. In addition, in the context of Sjögren disease, IgG against a peptide from Dtd2 binds more in anti-SSA antibody negative Sjögren disease cases compared to sicca-controls and combined controls, and also binds more in participants with positive focus score (FS) in labial salivary gland biopsies, indicating its potential as a biomarker for diagnosis [1,5].
In conclusion, Dtd2 is crucial for maintaining translation accuracy and protecting plants from aldehyde-induced stress. Its role as a potential biomarker in Sjögren disease adds to its significance. The gene knockout studies in plants have been instrumental in revealing its function in protecting against aldehyde toxicity, while its association with Sjögren disease provides new avenues for diagnosis in this autoimmune disorder [1,2,4,5].
References:
1. Parker, Maxwell, Zheng, Zihao, Lasarev, Michael R, Shelef, Miriam A, McCoy, Sara S. 2024. Novel autoantibodies help diagnose anti-SSA antibody negative Sjögren disease and predict abnormal labial salivary gland pathology. In Annals of the rheumatic diseases, 83, 1169-1180. doi:10.1136/ard-2023-224936. https://pubmed.ncbi.nlm.nih.gov/38702176/
2. Mazeed, Mohd, Singh, Raghvendra, Kumar, Pradeep, Kruparani, Shobha P, Sankaranarayanan, Rajan. 2021. Recruitment of archaeal DTD is a key event toward the emergence of land plants. In Science advances, 7, . doi:10.1126/sciadv.abe8890. https://pubmed.ncbi.nlm.nih.gov/33536220/
3. Ferri-Fioni, Maria-Laura, Fromant, Michel, Bouin, Anne-Pascale, Plateau, Pierre, Blanquet, Sylvain. 2006. Identification in archaea of a novel D-Tyr-tRNATyr deacylase. In The Journal of biological chemistry, 281, 27575-85. doi:. https://pubmed.ncbi.nlm.nih.gov/16844682/
4. Kumar, Pradeep, Roy, Ankit, Mukul, Shivapura Jagadeesha, Siddiqi, Imran, Sankaranarayanan, Rajan. 2024. A translation proofreader of archaeal origin imparts multi-aldehyde stress tolerance to land plants. In eLife, 12, . doi:10.7554/eLife.92827. https://pubmed.ncbi.nlm.nih.gov/38372335/
5. Parker, Maxwell, Zheng, Zihao, Lasarev, Michael, Shelef, Miriam A, McCoy, Sara S. 2023. Novel autoantibodies help diagnose anti-SSA antibody negative Sjögren's disease and predict abnormal labial salivary gland pathology. In medRxiv : the preprint server for health sciences, , . doi:10.1101/2023.08.29.23294775. https://pubmed.ncbi.nlm.nih.gov/37693588/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen