C57BL/6JCya-Rrp1bem1/Cya
Common Name:
Rrp1b-KO
Product ID:
S-KO-17663
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
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Basic Information
Strain Name
Rrp1b-KO
Strain ID
KOCMP-72462-Rrp1b-B6J-VB
Gene Name
Product ID
S-KO-17663
Gene Alias
2600005C20Rik; D030064A17; Kiaa0179; mKIAA0179
Background
C57BL/6JCya
NCBI ID
Modification
Conventional knockout
Chromosome
17
Phenotype
Document
Application
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Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Rrp1bem1/Cya mice (Catalog S-KO-17663) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000081339
NCBI RefSeq
NM_028244
Target Region
Exon 2
Size of Effective Region
~1.8 kb
Detailed Document
Overview of Gene Research
Rrp1b, also known as ribosomal RNA processing1 homolog B, is a novel candidate metastasis modifier gene. It physically and functionally interacts with SIPA1, reducing tumor growth and metastatic potential. It also modulates extracellular matrix (ECM) genes associated with tumor suppression, and is involved in ribosome biogenesis by targeting protein phosphatase 1 (PP1) to nucleoli and associating with Pre-60S ribosomal subunits [1,2,4].
Functional gene assays and in vitro experiments have shown that Rrp1b can significantly alter ECM gene expression, tumor growth, and dissemination in metastasis assays. Knockdown of Rrp1b induced a significant change in isoform expression in over 600 genes, affecting cell cycle and checkpoint regulation. Additionally, constitutional polymorphism within RRP1B was found to be significantly associated with tumor progression in breast cancer cohorts. In cervical cancer, specific RRP1B single nucleotide polymorphisms (SNPs) were associated with clinicopathological features and survival outcomes [1,2,3,5].
In conclusion, Rrp1b is a key gene in regulating metastasis and tumor progression, especially in breast and cervical cancers. Its functions in modulating gene expression, including through alternative splicing and histone methylation, and its role in ribosome biogenesis highlight its importance in cellular processes related to cancer. The study of Rrp1b through genetic models, such as analyzing its polymorphisms, provides valuable insights into cancer development and progression [1-3,5,9].
References:
1. Nanchari, Santhoshi Rani, Cingeetham, Anuradha, Meka, Phannibhushann, Digumarthi, Raghunadha Rao, Satti, Vishnupriya. 2014. Rrp1B gene polymorphism (1307T>C) in metastatic progression of breast cancer. In Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine, 36, 615-21. doi:10.1007/s13277-014-2613-6. https://pubmed.ncbi.nlm.nih.gov/25277657/
2. Crawford, Nigel P S, Qian, Xiaolan, Ziogas, Argyrios, Anton-Culver, Hoda, Hunter, Kent W. 2007. Rrp1b, a new candidate susceptibility gene for breast cancer progression and metastasis. In PLoS genetics, 3, e214. doi:. https://pubmed.ncbi.nlm.nih.gov/18081427/
3. Lee, M, Dworkin, A M, Gildea, D, Moorhead, G B, Crawford, N P S. 2013. RRP1B is a metastasis modifier that regulates the expression of alternative mRNA isoforms through interactions with SRSF1. In Oncogene, 33, 1818-27. doi:10.1038/onc.2013.133. https://pubmed.ncbi.nlm.nih.gov/23604122/
4. Chamousset, Delphine, De Wever, Veerle, Moorhead, Greg B, Lamond, Angus I, Trinkle-Mulcahy, Laura. 2010. RRP1B targets PP1 to mammalian cell nucleoli and is associated with Pre-60S ribosomal subunits. In Molecular biology of the cell, 21, 4212-26. doi:10.1091/mbc.E10-04-0287. https://pubmed.ncbi.nlm.nih.gov/20926688/
5. Balčiūnienė, Eglė, Inčiūra, Arturas, Juozaitytė, Elona, Ugenskienė, Rasa. 2024. Impact of RRP1B Variants on the Phenotype, Progression, and Metastasis of Cervical Cancer. In Cancers, 16, . doi:10.3390/cancers16071250. https://pubmed.ncbi.nlm.nih.gov/38610928/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen