C57BL/6JCya-Padi1em1/Cya
Common Name:
Padi1-KO
Product ID:
S-KO-19288
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
Quantity
Price:
Contact for Pricing
Basic Information
Strain Name
Padi1-KO
Strain ID
KOCMP-18599-Padi1-B6J-VB
Gene Name
Product ID
S-KO-19288
Gene Alias
Pdi1
Background
C57BL/6JCya
NCBI ID
Modification
Conventional knockout
Chromosome
4
Phenotype
Document
Application
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Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Padi1em1/Cya mice (Catalog S-KO-19288) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000026378
NCBI RefSeq
NM_011059
Target Region
Exon 3
Size of Effective Region
~0.9 kb
Detailed Document
Overview of Gene Research
Padi1, short for peptidylarginine deiminase 1, catalyzes protein citrullination, which involves the conversion of protein-bound arginine residues into citrulline residues in a calcium-dependent manner [7]. This process has been linked to various biological functions, including immune response regulation, and is involved in pathways such as ERK1/2-p38, MAPK, and those related to glycolysis [1,3,5]. It is important in processes like early embryo development, keratinocyte differentiation, and maintaining the integrity of the environment-tissue barrier interface [6,7,8].
In pancreatic ductal adenocarcinoma (PAAD), knockdown of Padi1 in cell lines suppressed cell migration and invasion, suggesting it may act as an oncogene regulating metastasis in vitro by activating the ERK1/2-p38 signaling pathway [1]. In colorectal cancer, Padi1 was highly expressed, and a risk-prognosis score based on its co-expressed genes could predict prognosis and immunotherapy efficacy [2]. In nasopharyngeal carcinoma, lncRNA TINCR regulated the Padi1-MAPK-MMP2/9 pathway, promoting tumor progression and chemoresistance [3]. Also, Padi1 expression in oncolytic adenoviruses exhibited anti-tumor activity against melanoma in mouse models [4].
In summary, Padi1 plays crucial roles in multiple biological processes and disease conditions. Its study through functional knockdown in cell lines and in vivo mouse models has revealed its significance in cancer metastasis, prognosis prediction, and immunotherapy in various cancers, highlighting its potential as a therapeutic target in these disease areas.
References:
1. Ji, Tengfei, Ma, Keqiang, Chen, Liang, Cao, Tiansheng. . PADI1 contributes to EMT in PAAD by activating the ERK1/2-p38 signaling pathway. In Journal of gastrointestinal oncology, 12, 1180-1190. doi:10.21037/jgo-21-283. https://pubmed.ncbi.nlm.nih.gov/34295566/
2. Zhang, Yi-Ran, Zhang, Lei, Li, Feng, Gong, Chao, Pan, Yun-Long. 2022. PADI1 and Its Co-Expressed Gene Signature Unveil Colorectal Cancer Prognosis and Immunotherapy Efficacy. In Journal of oncology, 2022, 8394816. doi:10.1155/2022/8394816. https://pubmed.ncbi.nlm.nih.gov/36471887/
3. Zheng, Zi-Qi, Li, Zhi-Xuan, Guan, Jia-Li, Liu, Na, Sun, Ying. 2020. Long Noncoding RNA TINCR-Mediated Regulation of Acetyl-CoA Metabolism Promotes Nasopharyngeal Carcinoma Progression and Chemoresistance. In Cancer research, 80, 5174-5188. doi:10.1158/0008-5472.CAN-19-3626. https://pubmed.ncbi.nlm.nih.gov/33067266/
4. Kuryk, Lukasz, Møller, Anne-Sophie W. 2023. Next generation oncolytic viruses expressing PADI1 and TIMP2 exhibit anti-tumor activity against melanoma in nude and humanized mouse models. In Molecular therapy oncolytics, 28, 158-170. doi:10.1016/j.omto.2023.01.002. https://pubmed.ncbi.nlm.nih.gov/36816748/
5. Coassolo, Sébastien, Davidson, Guillaume, Negroni, Luc, Romier, Christophe, Davidson, Irwin. 2021. Citrullination of pyruvate kinase M2 by PADI1 and PADI3 regulates glycolysis and cancer cell proliferation. In Nature communications, 12, 1718. doi:10.1038/s41467-021-21960-4. https://pubmed.ncbi.nlm.nih.gov/33741961/
6. Zhang, Xiaoqian, Liu, Xiaoqiu, Zhang, Mei, Coonrod, Scott A, Zhang, Xuesen. 2016. Peptidylarginine deiminase 1-catalyzed histone citrullination is essential for early embryo development. In Scientific reports, 6, 38727. doi:10.1038/srep38727. https://pubmed.ncbi.nlm.nih.gov/27929094/
7. Dong, Sijun, Ying, Shibo, Kojima, Toshio, Simon, Michel, Takahara, Hidenari. 2007. Crucial roles of MZF1 and Sp1 in the transcriptional regulation of the peptidylarginine deiminase type I gene (PADI1) in human keratinocytes. In The Journal of investigative dermatology, 128, 549-57. doi:. https://pubmed.ncbi.nlm.nih.gov/17851584/
8. Richter, G M, Wagner, G, Reichenmiller, K, Dommisch, H, Schaefer, A S. 2021. Exome Sequencing of 5 Families with Severe Early-Onset Periodontitis. In Journal of dental research, 101, 151-157. doi:10.1177/00220345211029266. https://pubmed.ncbi.nlm.nih.gov/34515563/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen