C57BL/6JCya-Deaf1em1/Cya
Common Name:
Deaf1-KO
Product ID:
S-KO-19926
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
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Basic Information
Strain Name
Deaf1-KO
Strain ID
KOCMP-54006-Deaf1-B6J-VA
Gene Name
Product ID
S-KO-19926
Gene Alias
C230009B13Rik; NUDR
Background
C57BL/6JCya
NCBI ID
Modification
Conventional knockout
Chromosome
7
Phenotype
Document
Application
--
Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Deaf1em1/Cya mice (Catalog S-KO-19926) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000080553
NCBI RefSeq
NM_016874
Target Region
Exon 2~5
Size of Effective Region
~3.0 kb
Detailed Document
Overview of Gene Research
Deaf1, short for Deformed epidermal autoregulatory factor-1, is a transcriptional regulator. It binds to unmethylated and variably spaced CpG dinucleotide motifs, with a consensus of a repeated TTCGGG motif [3]. It is involved in multiple pathways and has significant biological importance, being associated with autoimmune, neurological disorders, and muscle regeneration [1,3].
RNA-sequencing using hippocampal RNA from mice with conditional deletion of Deaf1 in the central nervous system showed that loss of Deaf1 activity results in altered expression of genes involved in neuronal function, dendritic spine maintenance, development, and activity, with reduced dendritic spines in hippocampal regions [2]. In muscle, Deaf1 is transcriptionally repressed by FOXOs and targets to Pik3c3 and Atg16l1 promoter regions to suppress their expression. Deaf1 depletion or overexpression in muscle stem cells leads to defects in muscle regeneration, highlighting its role in fine-tuning autophagy during muscle regeneration [1].
In conclusion, Deaf1 is crucial for normal neuronal function, dendritic spine maintenance, and muscle regeneration. Mouse models with conditional deletion of Deaf1 have provided insights into its role in neurological and muscle-related conditions, contributing to our understanding of the underlying molecular mechanisms in these disease areas [1,2].
References:
1. Goh, Kah Yong, Lee, Wen Xing, Choy, Sze Mun, Harmston, Nathan, Tang, Hong-Wen. 2024. FOXO-regulated DEAF1 controls muscle regeneration through autophagy. In Autophagy, 20, 2632-2654. doi:10.1080/15548627.2024.2374693. https://pubmed.ncbi.nlm.nih.gov/38963021/
2. McGee, Stacey R, Rajamanickam, Shivakumar, Adhikari, Sandeep, Elsea, Sarah H, Jensik, Philip J. . Expansion and mechanistic insights into de novo DEAF1 variants in DEAF1-associated neurodevelopmental disorders. In Human molecular genetics, 32, 386-401. doi:10.1093/hmg/ddac200. https://pubmed.ncbi.nlm.nih.gov/35981081/
3. Jensik, Philip J, Vargas, Jesse D, Reardon, Sara N, Huggenvik, Jodi I, Collard, Michael W. 2014. DEAF1 binds unmethylated and variably spaced CpG dinucleotide motifs. In PloS one, 9, e115908. doi:10.1371/journal.pone.0115908. https://pubmed.ncbi.nlm.nih.gov/25531106/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen