C57BL/6JCya-Iffo1em1flox/Cya
Common Name:
Iffo1-flox
Product ID:
S-CKO-10479
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
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Basic Information
Strain Name
Iffo1-flox
Strain ID
CKOCMP-320678-Iffo1-B6J-VA
Gene Name
Product ID
S-CKO-10479
Gene Alias
4733401N06Rik; A930037G23Rik; HOM-TES-103; Iffo
Background
C57BL/6JCya
NCBI ID
Modification
Conditional knockout
Chromosome
6
Phenotype
Document
Application
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Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Iffo1em1flox/Cya mice (Catalog S-CKO-10479) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000117675
NCBI RefSeq
NM_001039669
Target Region
Exon 2~3
Size of Effective Region
~1.6 kb
Detailed Document
Overview of Gene Research
IFFO1, also known as Intermediate filament family orphan 1, is a non-homologous end-joining protein. It structurally forms a heterotetramer with XRCC4 and is recruited to DNA damage sites by XRCC4, promoting the repair of DNA double-strand breaks in a parallel pathway with XLF. IFFO1 also interacts with lamin A/C to form an interior nucleoskeleton, playing a crucial role in maintaining genome integrity [2,3].
In ovarian cancer, IFFO1 is downregulated at both transcriptional and post-transcriptional levels. Transcriptionally, HDAC5 recruited by the transcription factor YY1 inhibits its expression, and post-transcriptionally, the METTL3/YTHDF2 axis regulates its mRNA stability in an m6A-dependent manner. Overexpression of IFFO1 in ovarian cancer cells inhibits the translocation of β-catenin to the nucleus, decreasing tumor metastasis and cisplatin resistance. Mice injected with IFFO1-overexpressing cells had lower ascites volumes and tumor weights in the peritoneal cavity compared to control-injected mice, indicating its role as a tumor suppressor [1]. Also, in ovarian cancer, methylation of the IFFO1 promoter (IFFO1-M) is frequently detected in tumors and rarely in normal controls, suggesting its potential as a blood-based biomarker for ovarian cancer detection [4]. High levels of cell-free tumour-derived DNA (ctDNA) with methylated IFFO1 promoter in ascites are associated with a shorter paracentesis-free interval, and ctDNA presence in plasma is unfavorable for survival [5].
In conclusion, IFFO1 is essential for DNA double-strand break repair and maintaining genome integrity. In ovarian cancer, model-based research, especially overexpression in mice, has revealed its role as a tumor suppressor. Its downregulation mechanisms and potential as a biomarker highlight its significance in understanding and treating ovarian cancer.
References:
1. Zhang, Ye, Qiu, Jian-Ge, Jia, Xiao-Yu, Wang, Lin, Jiang, Bing-Hua. 2022. METTL3-mediated N6-methyladenosine modification and HDAC5/YY1 promote IFFO1 downregulation in tumor development and chemo-resistance. In Cancer letters, 553, 215971. doi:10.1016/j.canlet.2022.215971. https://pubmed.ncbi.nlm.nih.gov/36257380/
2. Li, Wen, Bai, Xiuzhen, Li, Jun, Liu, Yingfang, Xu, Dongyi. 2019. The nucleoskeleton protein IFFO1 immobilizes broken DNA and suppresses chromosome translocation during tumorigenesis. In Nature cell biology, 21, 1273-1285. doi:10.1038/s41556-019-0388-0. https://pubmed.ncbi.nlm.nih.gov/31548606/
3. Ghosh, Dipayan, Raghavan, Sathees C. 2021. Nonhomologous end joining: new accessory factors fine tune the machinery. In Trends in genetics : TIG, 37, 582-599. doi:10.1016/j.tig.2021.03.001. https://pubmed.ncbi.nlm.nih.gov/33785198/
4. Campan, Mihaela, Moffitt, Melissa, Houshdaran, Sahar, Pearce, Celeste L, Laird, Peter W. 2011. Genome-scale screen for DNA methylation-based detection markers for ovarian cancer. In PloS one, 6, e28141. doi:10.1371/journal.pone.0028141. https://pubmed.ncbi.nlm.nih.gov/22163280/
5. Werner, Bonnita, Sjoquist, Katrin M, Espinoza, David, Warton, Kristina, Ford, Caroline E. 2024. Cell-free DNA in plasma and ascites as a biomarker of bevacizumab response- a translational research sub-study of the REZOLVE (ANZGOG-1101) clinical trial. In Translational oncology, 43, 101914. doi:10.1016/j.tranon.2024.101914. https://pubmed.ncbi.nlm.nih.gov/38417292/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen