C57BL/6JCya-Slc26a10em1flox/Cya
Common Name:
Slc26a10-flox
Product ID:
S-CKO-05994
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
Quantity
Price:
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Basic Information
Strain Name
Slc26a10-flox
Strain ID
CKOCMP-216441-Slc26a10-B6J-VA
Gene Name
Product ID
S-CKO-05994
Gene Alias
D630010I07
Background
C57BL/6JCya
NCBI ID
Modification
Conditional knockout
Chromosome
10
Phenotype
Document
Application
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Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Slc26a10em1flox/Cya mice (Catalog S-CKO-05994) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000222911
NCBI RefSeq
NM_177615.4
Target Region
Exon 3~8
Size of Effective Region
~3.2 kb
Detailed Document
Overview of Gene Research
Slc26a10 is a member of the SLC26 gene family. While its function in insects has been explored, in mammals, it's considered a pseudogene [1,2]. In Nilaparvata lugens, NlSLC26A10 contains 11 transmembrane regions and a STAS domain, and plays an essential role in the reproduction of this insect. It affects ovarian development, egg production, hatchability, and the number of yeast-like symbionts in mature oocytes, possibly by decreasing juvenile hormone level and vitellogenin expression [1].
In a study on community-acquired pneumonia, SLC26A10 was identified as one of the main gene hubs through protein-protein-interaction-network analysis, with differences in its expression between patients who died and those who survived [3]. In nasal intestinal-type adenocarcinomas, a specific hemimethylated profile of SLC26A10 was found, though only CACNA1C was overexpressed both transcriptionally and immunohistochemically [4]. In Alzheimer's disease, SLC26A10 was associated with cortical thickness, with the identified genes and pathways potentially providing insights into brain atrophy mechanisms [5]. Also, in a GWAS on abdominal adiposity-related traits in Korean men, an SNP within SLC26A10 was associated with visceral adipose tissue-adjusted BMI, though the finding didn't reach significance in the replication study [6]. In acral melanoma, SLC26A10 was among the genes with significantly deleterious mutations potentially related to invasion and metastasis, identified through whole-exome sequencing [7]. In guinea pig pancreatic ducts, SLC26A10 was localized to the luminal membrane, suggesting it may be involved in pancreatic secretion by mediating electrogenic HCO3 -transport [8]. Additionally, in forensic science, some CpG markers in the promoter region of SLC26A10 were found to have menstrual-blood-specific methylation patterns, useful for body fluid identification [9].
In conclusion, Slc26a10 shows diverse associations across different biological systems and diseases. In insects, it's crucial for reproduction. In human diseases, its role ranges from potential implications in pneumonia, nasal adenocarcinomas, Alzheimer's disease, abdominal adiposity, acral melanoma, to its use in forensic body-fluid identification. Although it's a pseudogene in mammals, its functions in other species and its associations in human disease-related studies highlight its importance in understanding various biological processes and disease mechanisms.
References:
1. Zhang, Ruijuan, Ji, Jinliang, Li, Yabin, Yu, Xiaoping, Xu, Yipeng. 2022. Molecular Characterization and RNA Interference Analysis of SLC26A10 From Nilaparvata lugens (Stål). In Frontiers in physiology, 13, 853956. doi:10.3389/fphys.2022.853956. https://pubmed.ncbi.nlm.nih.gov/35370768/
2. Sindić, Aleksandra, Chang, Min-Hwang, Mount, David B, Romero, Michael F. . Renal physiology of SLC26 anion exchangers. In Current opinion in nephrology and hypertension, 16, 484-90. doi:. https://pubmed.ncbi.nlm.nih.gov/17693766/
3. Viasus, Diego, Simonetti, Antonella F, Nonell, Lara, Gudiol, Carlota, Carratalà, Jordi. 2023. Whole-Blood Gene Expression Profiles Associated with Mortality in Community-Acquired Pneumonia. In Biomedicines, 11, . doi:10.3390/biomedicines11020429. https://pubmed.ncbi.nlm.nih.gov/36830965/
4. Gallet, Patrice, Oussalah, Abderrahim, Pouget, Celso, Gueant, Jean Louis, Houlgatte, Rémi. 2021. Integrative genomics analysis of nasal intestinal-type adenocarcinomas demonstrates the major role of CACNA1C and paves the way for a simple diagnostic tool in male woodworkers. In Clinical epigenetics, 13, 179. doi:10.1186/s13148-021-01122-5. https://pubmed.ncbi.nlm.nih.gov/34563241/
5. Kim, Bo-Hyun, Choi, Yong-Ho, Yang, Jin-Ju, Nho, Kwangsik, Lee, Jong-Min. . Identification of Novel Genes Associated with Cortical Thickness in Alzheimer's Disease: Systems Biology Approach to Neuroimaging Endophenotype. In Journal of Alzheimer's disease : JAD, 75, 531-545. doi:10.3233/JAD-191175. https://pubmed.ncbi.nlm.nih.gov/32310165/
6. Kim, Hyun-Jin, Son, Ho-Young, Sung, Joohon, Kim, Jong-Il, Park, Jin-Ho. 2022. A Genome-Wide Association Study on Abdominal Adiposity-Related Traits in Adult Korean Men. In Obesity facts, 15, 590-599. doi:10.1159/000524670. https://pubmed.ncbi.nlm.nih.gov/35472719/
7. Lim, Youngkyoung, Lee, Dong-Youn. 2021. Identification of genetic mutations related to invasion and metastasis of acral melanoma via whole-exome sequencing. In The Journal of dermatology, 48, 999-1006. doi:10.1111/1346-8138.15841. https://pubmed.ncbi.nlm.nih.gov/33890690/
8. Andharia, N, Hayashi, M, Matsuda, H. 2018. Electrophysiological properties of anion exchangers in the luminal membrane of guinea pig pancreatic duct cells. In Pflugers Archiv : European journal of physiology, 470, 897-907. doi:10.1007/s00424-018-2116-1. https://pubmed.ncbi.nlm.nih.gov/29399744/
9. Lee, Hwan Young, Jung, Sang-Eun, Lee, Eun Hee, Yang, Woo Ick, Shin, Kyoung-Jin. 2016. DNA methylation profiling for a confirmatory test for blood, saliva, semen, vaginal fluid and menstrual blood. In Forensic science international. Genetics, 24, 75-82. doi:10.1016/j.fsigen.2016.06.007. https://pubmed.ncbi.nlm.nih.gov/27344518/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen