C57BL/6JCya-Atg13em1/Cya
Common Name:
Atg13-KO
Product ID:
S-KO-17823
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
Quantity
Price:
Contact for Pricing
Basic Information
Strain Name
Atg13-KO
Strain ID
KOCMP-51897-Atg13-B6J-VA
Gene Name
Product ID
S-KO-17823
Gene Alias
1110053A20Rik; D2Ertd391e; Harbi1
Background
C57BL/6JCya
NCBI ID
Modification
Conventional knockout
Chromosome
2
Phenotype
Document
Application
--
Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Atg13em1/Cya mice (Catalog S-KO-17823) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000028678
NCBI RefSeq
NM_001355419
Target Region
Exon 5
Size of Effective Region
~0.7 kb
Detailed Document
Overview of Gene Research
Atg13, an integral part of the ULK1 kinase complex in vertebrates, is crucial for autophagy. Autophagy is an intracellular degradation process involved in recycling cytoplasmic components and removing organelles, protein aggregates, or pathogens [2]. The ULK1 complex, containing Ser/Thr kinase ULK1 and accessory proteins including Atg13, plays a key role in autophagy initiation, sensing nutritional status signals, recruiting downstream ATG proteins, and governing autophagosome formation [3].
Atg13-mediated ULK complex positively regulated autophagy and inflammation in lung epithelial cells upon PM2.5 treatment. PM2.5-downregulated ALKBH5 protein expression promoted m6A modification of Atg13 mRNA, and knockout of ALKBH5 in mice further accelerated ULK complex-regulated autophagy, inflammation, and pulmonary fibrosis, highlighting its role in PM2.5-induced pulmonary fibrosis [1]. Atg13-deficient mice die in utero, with embryos showing growth retardation and myocardial growth defects. In cultured fibroblasts, Atg13 deficiency blocks autophagosome formation at an upstream step, and deletion of Atg13 enhances sensitivity to TNF-α-induced apoptosis [4].
In conclusion, Atg13 is essential for autophagy, with its deficiency having severe impacts on embryonic development and cardiac growth. Its role in regulating autophagy-mediated inflammation in PM2.5-induced pulmonary fibrosis shows its significance in disease-related research. Studies using Atg13 knockout mouse models have provided valuable insights into its biological functions and its implications in specific disease conditions.
References:
1. Ning, Jie, Pei, Zijie, Wang, Mengruo, Leng, Shuguang, Zhang, Rong. 2023. Site-specific Atg13 methylation-mediated autophagy regulates epithelial inflammation in PM2.5-induced pulmonary fibrosis. In Journal of hazardous materials, 457, 131791. doi:10.1016/j.jhazmat.2023.131791. https://pubmed.ncbi.nlm.nih.gov/37295326/
2. Alers, Sebastian, Wesselborg, Sebastian, Stork, Björn. . ATG13: just a companion, or an executor of the autophagic program? In Autophagy, 10, 944-56. doi:10.4161/auto.28987. https://pubmed.ncbi.nlm.nih.gov/24879146/
3. Wang, Qiuling, Hou, Suiwen. 2022. The emerging roles of ATG1/ATG13 kinase complex in plants. In Journal of plant physiology, 271, 153653. doi:10.1016/j.jplph.2022.153653. https://pubmed.ncbi.nlm.nih.gov/35255243/
4. Kaizuka, Takeshi, Mizushima, Noboru. 2015. Atg13 Is Essential for Autophagy and Cardiac Development in Mice. In Molecular and cellular biology, 36, 585-95. doi:10.1128/MCB.01005-15. https://pubmed.ncbi.nlm.nih.gov/26644405/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen