C57BL/6JCya-Ddx18em1flox/Cya
Common Name:
Ddx18-flox
Product ID:
S-CKO-19071
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
Quantity
Price:
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Basic Information
Strain Name
Ddx18-flox
Strain ID
CKOCMP-66942-Ddx18-B6J-VB
Gene Name
Product ID
S-CKO-19071
Gene Alias
2310005B10Rik
Background
C57BL/6JCya
NCBI ID
Modification
Conditional knockout
Chromosome
1
Phenotype
Document
Application
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Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Ddx18em1flox/Cya mice (Catalog S-CKO-19071) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000001724
NCBI RefSeq
NM_025860
Target Region
Exon 4~8
Size of Effective Region
~3.7 kb
Detailed Document
Overview of Gene Research
DDX18, also known as DEAD-box RNA helicase 18, is a crucial regulator of RNA metabolism. It participates in various cellular processes, including cell-cycle control, and is involved in pathways related to R-loop homeostasis, chromatin remodeling, and nucleolus phase separation. It plays a significant role in maintaining genomic stability, pluripotency of stem cells, and is associated with multiple disease-related processes [1,3,4,5].
In zebrafish, Ddx18 is essential for cell-cycle progression in hematopoietic cells. Homozygous Ddx18 mutant embryos show a profound loss of myeloid and erythroid cells, along with apoptosis and G1 cell-cycle arrest [7]. In human cells, Ddx18 depletion leads to aberrant R-loop accumulation, DNA-replication defects, and genome instability. RNase H1 overexpression can rescue these DNA-repair defects caused by Ddx18 depletion [1]. In pancreatic cancer, DDX18 drives tumor immune escape by up-regulating STAT1 expression [2]. In lung adenocarcinoma, DDX18 promotes tumorigenesis by up-regulating CDK4 and facilitating cell-cycle progression [4]. In colorectal cancer, DDX18 affects chemotherapy sensitivity by regulating genomic stability [5]. In gastric cancer, DDX18 promotes cancer by influencing the maturation of microRNA-21 [6]. In human head and neck squamous cell carcinoma, DNA 6mA demethylase ALKBH1 regulates DDX18 expression to promote cell proliferation [8]. In porcine reproductive and respiratory syndrome virus infection, host DDX18 unwinds a G-quadruplex structure in the viral genome to promote viral replication [9]. In pigs, DDX18 is one of the hub genes that helps in vivo-matured oocytes resist post-ovulatory aging [10].
In conclusion, DDX18 is a multi-functional gene involved in RNA metabolism, cell-cycle regulation, and maintaining genomic stability. Through gene-knockout and other in vivo models in zebrafish and human cells, its role in various diseases such as cancer, viral infection, and oocyte aging has been revealed. Understanding DDX18 provides insights into disease mechanisms and potential therapeutic targets.
References:
1. Lin, Wen-Ling, Chen, Jung-Kuei, Wen, Xuemei, Paull, Tanya T, Liu, Hung-Wen. . DDX18 prevents R-loop-induced DNA damage and genome instability via PARP-1. In Cell reports, 40, 111089. doi:10.1016/j.celrep.2022.111089. https://pubmed.ncbi.nlm.nih.gov/35858569/
2. Dong, Guoying, Wang, Qin, Wen, Mingxin, Wei, Guangwei, Wang, Yunshan. 2023. DDX18 drives tumor immune escape through transcription-activated STAT1 expression in pancreatic cancer. In Oncogene, 42, 3000-3014. doi:10.1038/s41388-023-02817-0. https://pubmed.ncbi.nlm.nih.gov/37620449/
3. Shi, Xianle, Li, Yanjing, Zhou, Hongwei, Chen, Yong, Wang, Jianlong. 2024. DDX18 coordinates nucleolus phase separation and nuclear organization to control the pluripotency of human embryonic stem cells. In Nature communications, 15, 10803. doi:10.1038/s41467-024-55054-8. https://pubmed.ncbi.nlm.nih.gov/39738032/
4. Feng, Bingbing, Wang, Xinying, Qiu, Ding, Zhang, Shuishen, Tang, Ce. 2024. DDX18 Facilitates the Tumorigenesis of Lung Adenocarcinoma by Promoting Cell Cycle Progression through the Upregulation of CDK4. In International journal of molecular sciences, 25, . doi:10.3390/ijms25094953. https://pubmed.ncbi.nlm.nih.gov/38732173/
5. Zhao, Wenchao, Luo, Qingqing, Zhan, Han, Deng, Tan, Duan, Huaxin. 2024. DDX18 influences chemotherapy sensitivity in colorectal cancer by regulating genomic stability. In Experimental cell research, 444, 114344. doi:10.1016/j.yexcr.2024.114344. https://pubmed.ncbi.nlm.nih.gov/39577603/
6. Zhang, Yeqian, Yu, Fengrong, Ni, Bo, Kong, Seong-Ho, Zhu, Chunchao. 2021. The RNA-Binding Protein DDX18 Promotes Gastric Cancer by Affecting the Maturation of MicroRNA-21. In Frontiers in oncology, 10, 598238. doi:10.3389/fonc.2020.598238. https://pubmed.ncbi.nlm.nih.gov/33489896/
7. Payne, Elspeth M, Bolli, Niccolò, Rhodes, Jennifer, Cotter, Finbarr E, Look, A Thomas. 2011. Ddx18 is essential for cell-cycle progression in zebrafish hematopoietic cells and is mutated in human AML. In Blood, 118, 903-15. doi:10.1182/blood-2010-11-318022. https://pubmed.ncbi.nlm.nih.gov/21653321/
8. Guo, Chengli, Liu, Zheming, Zhang, Haojian. 2023. DNA 6mA demethylase ALKBH1 regulates DDX18 expression to promote proliferation of human head and neck squamous cell carcinoma. In Cellular oncology (Dordrecht, Netherlands), 46, 1097-1111. doi:10.1007/s13402-023-00800-1. https://pubmed.ncbi.nlm.nih.gov/36976498/
9. Fang, Puxian, Xie, Congbao, Pan, Ting, Wei, Dengguo, Xiao, Shaobo. . Unfolding of an RNA G-quadruplex motif in the negative strand genome of porcine reproductive and respiratory syndrome virus by host and viral helicases to promote viral replication. In Nucleic acids research, 51, 10752-10767. doi:10.1093/nar/gkad759. https://pubmed.ncbi.nlm.nih.gov/37739415/
10. Zhan, Cheng-Lin, Zhou, Dongjie, Sun, Ming-Hong, Sa, Soo-Jin, Cui, Xiang-Shun. 2024. In Vivo-Matured Oocyte Resists Post-Ovulatory Aging through the Hub Genes DDX18 and DNAJC7 in Pigs. In Antioxidants (Basel, Switzerland), 13, . doi:10.3390/antiox13070867. https://pubmed.ncbi.nlm.nih.gov/39061935/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen