C57BL/6JCya-Atg13em1flox/Cya
Common Name:
Atg13-flox
Product ID:
S-CKO-18536
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
Quantity
Price:
Contact for Pricing
Basic Information
Strain Name
Atg13-flox
Strain ID
CKOCMP-51897-Atg13-B6J-VB
Gene Name
Product ID
S-CKO-18536
Gene Alias
1110053A20Rik; D2Ertd391e; Harbi1
Background
C57BL/6JCya
NCBI ID
Modification
Conditional knockout
Chromosome
2
Phenotype
Document
Application
--
Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Atg13em1flox/Cya mice (Catalog S-CKO-18536) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000028678
NCBI RefSeq
NM_001355419
Target Region
Exon 5
Size of Effective Region
~0.7 kb
Detailed Document
Overview of Gene Research
Atg13, a component of the ULK1 kinase complex in vertebrates (equivalent to the Atg1 kinase complex in yeast), is essential for autophagy initiation. Autophagy is a conserved intracellular degradation process involved in recycling cytoplasmic components and removing cellular debris, pathogens, etc. Atg13 functions in sensing nutritional status signals, recruiting downstream ATG proteins to the autophagosome formation site, and governing autophagosome formation [2,3].
Atg13-deficient mice, similar to FIP200-deficient mice, die in utero. Atg13-deficient embryos show growth retardation and myocardial growth defects. In cultured fibroblasts, Atg13 deficiency blocks autophagosome formation at an upstream step. Also, deletion of Atg13 enhances sensitivity to TNF-α-induced apoptosis [4]. In PM2.5-induced pulmonary fibrosis, PM2.5-downregulated ALKBH5 protein expression promotes m6A modification of Atg13 mRNA at site 767 in lung epithelial cells, and Atg13-mediated ULK complex positively regulates autophagy and inflammation [1].
In conclusion, Atg13 is crucial for autophagy and cardiac development. Gene knockout mouse models of Atg13 have revealed its roles in autophagy-related biological processes and diseases such as pulmonary fibrosis. These findings contribute to understanding the molecular mechanisms underlying autophagy-related disorders and may provide potential therapeutic targets for diseases like PM2.5-induced pulmonary fibrosis.
References:
1. Ning, Jie, Pei, Zijie, Wang, Mengruo, Leng, Shuguang, Zhang, Rong. 2023. Site-specific Atg13 methylation-mediated autophagy regulates epithelial inflammation in PM2.5-induced pulmonary fibrosis. In Journal of hazardous materials, 457, 131791. doi:10.1016/j.jhazmat.2023.131791. https://pubmed.ncbi.nlm.nih.gov/37295326/
2. Alers, Sebastian, Wesselborg, Sebastian, Stork, Björn. . ATG13: just a companion, or an executor of the autophagic program? In Autophagy, 10, 944-56. doi:10.4161/auto.28987. https://pubmed.ncbi.nlm.nih.gov/24879146/
3. Wang, Qiuling, Hou, Suiwen. 2022. The emerging roles of ATG1/ATG13 kinase complex in plants. In Journal of plant physiology, 271, 153653. doi:10.1016/j.jplph.2022.153653. https://pubmed.ncbi.nlm.nih.gov/35255243/
4. Kaizuka, Takeshi, Mizushima, Noboru. 2015. Atg13 Is Essential for Autophagy and Cardiac Development in Mice. In Molecular and cellular biology, 36, 585-95. doi:10.1128/MCB.01005-15. https://pubmed.ncbi.nlm.nih.gov/26644405/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen