C57BL/6JCya-Padi1em1flox/Cya
Common Name:
Padi1-flox
Product ID:
S-CKO-04222
Background:
C57BL/6JCya
Product Type
Age
Genotype
Sex
Quantity
Price:
Contact for Pricing
Basic Information
Strain Name
Padi1-flox
Strain ID
CKOCMP-18599-Padi1-B6J-VA
Gene Name
Product ID
S-CKO-04222
Gene Alias
Pdi1
Background
C57BL/6JCya
NCBI ID
Modification
Conditional knockout
Chromosome
4
Phenotype
Document
Application
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Note: When using this mouse strain in a publication, please cite “C57BL/6JCya-Padi1em1flox/Cya mice (Catalog S-CKO-04222) were purchased from Cyagen.”
Strain Description
Ensembl Number
ENSMUST00000026378
NCBI RefSeq
NM_011059
Target Region
Exon 3
Size of Effective Region
~0.9 kb
Detailed Document
Overview of Gene Research
Padi1, or peptidylarginine deiminase 1, catalyzes protein citrullination, a post-translational modification that impacts protein function [5]. It has been associated with regulating immune responses, with its expression linked to pathways in the tumor immune microenvironment [2]. Padi1 also plays a role in the regulation of chromatin structure and gene activity via histone citrullination, being essential for early embryo development [7].
In cancer research, Padi1 has shown oncogenic properties. In pancreatic ductal adenocarcinoma (PAAD), it promotes the epithelial-mesenchymal transition (EMT) by activating the ERK1/2-p38 signaling pathway. Knockdown of Padi1 in CFPAN-1 and HPAC cells suppressed cell migration and invasion, while overexpression in PANC-1 and Bxpc-3 cells had the opposite effect [1]. In colorectal cancer, Padi1 is highly expressed, and a risk-prognosis score based on its co-expressed genes can predict prognosis and immunotherapy efficacy [2]. In nasopharyngeal carcinoma, the lncRNA TINCR-mediated regulation of the Padi1-MAPK-MMP2/9 pathway promotes tumor progression and chemoresistance [3]. Oncolytic viruses expressing Padi1 exhibit anti-tumor activity against melanoma, increasing the percentage of activated CD8+ T cells in tumor-infiltrating lymphocytes [4]. Also, Padi1 and Padi3 regulate glycolysis and cancer cell proliferation by citrullinating pyruvate kinase M2 [6].
In conclusion, Padi1 is a crucial enzyme in various biological processes, especially in the context of embryonic development and cancer. Its role in promoting cancer cell metastasis and its association with the tumor immune microenvironment make it a potential target for cancer therapy. The gene knockout or knockdown studies in cancer cell lines have significantly contributed to understanding its function in cancer-related biological processes [1,2,3,4,6].
References:
1. Ji, Tengfei, Ma, Keqiang, Chen, Liang, Cao, Tiansheng. . PADI1 contributes to EMT in PAAD by activating the ERK1/2-p38 signaling pathway. In Journal of gastrointestinal oncology, 12, 1180-1190. doi:10.21037/jgo-21-283. https://pubmed.ncbi.nlm.nih.gov/34295566/
2. Zhang, Yi-Ran, Zhang, Lei, Li, Feng, Gong, Chao, Pan, Yun-Long. 2022. PADI1 and Its Co-Expressed Gene Signature Unveil Colorectal Cancer Prognosis and Immunotherapy Efficacy. In Journal of oncology, 2022, 8394816. doi:10.1155/2022/8394816. https://pubmed.ncbi.nlm.nih.gov/36471887/
3. Zheng, Zi-Qi, Li, Zhi-Xuan, Guan, Jia-Li, Liu, Na, Sun, Ying. 2020. Long Noncoding RNA TINCR-Mediated Regulation of Acetyl-CoA Metabolism Promotes Nasopharyngeal Carcinoma Progression and Chemoresistance. In Cancer research, 80, 5174-5188. doi:10.1158/0008-5472.CAN-19-3626. https://pubmed.ncbi.nlm.nih.gov/33067266/
4. Kuryk, Lukasz, Møller, Anne-Sophie W. 2023. Next generation oncolytic viruses expressing PADI1 and TIMP2 exhibit anti-tumor activity against melanoma in nude and humanized mouse models. In Molecular therapy oncolytics, 28, 158-170. doi:10.1016/j.omto.2023.01.002. https://pubmed.ncbi.nlm.nih.gov/36816748/
5. Nava-Quiroz, Karol J, López-Flores, Luis A, Pérez-Rubio, Gloria, Rojas-Serrano, Jorge, Falfán-Valencia, Ramcés. 2023. Peptidyl Arginine Deiminases in Chronic Diseases: A Focus on Rheumatoid Arthritis and Interstitial Lung Disease. In Cells, 12, . doi:10.3390/cells12242829. https://pubmed.ncbi.nlm.nih.gov/38132149/
6. Coassolo, Sébastien, Davidson, Guillaume, Negroni, Luc, Romier, Christophe, Davidson, Irwin. 2021. Citrullination of pyruvate kinase M2 by PADI1 and PADI3 regulates glycolysis and cancer cell proliferation. In Nature communications, 12, 1718. doi:10.1038/s41467-021-21960-4. https://pubmed.ncbi.nlm.nih.gov/33741961/
7. Zhang, Xiaoqian, Liu, Xiaoqiu, Zhang, Mei, Coonrod, Scott A, Zhang, Xuesen. 2016. Peptidylarginine deiminase 1-catalyzed histone citrullination is essential for early embryo development. In Scientific reports, 6, 38727. doi:10.1038/srep38727. https://pubmed.ncbi.nlm.nih.gov/27929094/
Quality Control Standard
Sperm Test
Pre-cryopreservation: Measurement of sperm concentration, determination of sperm viability.
Post-cryopreservation: A vial of cryopreserved sperms is selected for in-vitro fertilization from each batch.
Environmental Standards:SPF
Available Region:Global
Source:Cyagen